BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009H01LP1|AL426102
(825 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1713 1600 0.0
>3x_Contig1713
Length = 18539
Score = 1600 bits (806), Expect = 0.0
Identities = 821/826 (99%), Gaps = 1/826 (0%)
Strand = Plus / Minus
Query: 1 gatctcagaggattcc-atacgtcacctgaactcaacggggatccagaagtggcgaccat 59
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15954 gatctcagaggattcccatacgtcacctgaactcaacggggatccagaagtggcgaccat 15895
Query: 60 aacggggtccaaaacaataggcactttgatctgatcaaactgggaaactactgctttcaa 119
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 15894 aacggggtccaaaacaataggcactttgatctgatccaactgggaaactactgctttcaa 15835
Query: 120 agctcctaagttgagcatcccgatcttaatcgcatcgcatctcatgcttctcaaattatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15834 agctcctaagttgagcatcccgatcttaatcgcatcgcatctcatgcttctcaaattatg 15775
Query: 180 accaagaatttctttgatatgctgctcatcggtattgataaaagaatacacttttccggg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15774 accaagaatttctttgatatgctgctcatcggtattgataaaagaatacacttttccggg 15715
Query: 240 cgtctgacatgtcaatgcagtmatacacgtcatagcatagcatccttgagcactaattgt 299
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 15714 cgtctgacatgtcaatgcagtaatacacgtcatagcatagcatccttgagcactaattgt 15655
Query: 300 ctttacatcggcttcaacgccggcaccaccactgctatcgcttccagccacggtcaacac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15654 ctttacatcggcttcaacgccggcaccaccactgctatcgcttccagccacggtcaacac 15595
Query: 360 acctggcaatttcctctcactccaatgagtgcccagatacaaaggtgaactaatctgata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15594 acctggcaatttcctctcactccaatgagtgcccagatacaaaggtgaactaatctgata 15535
Query: 420 ctcgaattctttcataaagtacgcgctggatactgtatgtttgtacttgctgatgctaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15534 ctcgaattctttcataaagtacgcgctggatactgtatgtttgtacttgctgatgctaat 15475
Query: 480 caaagatacaacatgcaatggtttaggtaacaagtatattatcaccttcatatggctatc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15474 caaagatacaacatgcaatggtttaggtaacaagtatattatcaccttcatatggctatc 15415
Query: 540 tttttatatatgaacttcgattgcggttccaattctaacagtttcccacttgagcgaggt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15414 tttttatatatgaacttcgattgcggttccaattctaacagtttcccacttgagcgaggt 15355
Query: 600 cagcygatgacacattttacagctctaaacagtgccataactaacagttaggactgataa 659
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15354 cagctgatgacacattttacagctctaaacagtgccataactaacagttaggactgataa 15295
Query: 660 atgggtttccagagtgtactaacagatgtctggtggaagtaagttaaagaagcacttgtt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15294 atgggtttccagagtgtactaacagatgtctggtggaagtaagttaaagaagcacttgtt 15235
Query: 720 aggacagagtctttgggctctatcctttggttccgatttccctgttatataatgaacatt 779
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15234 aggacagagtccttgggctctatcctttggttccgatttccctgttatataatgaacatt 15175
Query: 780 tcactgacgcgcgacagatttgatagatcacgtgatacatactgac 825
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15174 tcactgacgcgcgacagatttgatagatcacgtgatacatactgac 15129
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5150
Number of Sequences: 1807
Number of extensions: 5150
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 825
length of database: 10,358,551
effective HSP length: 16
effective length of query: 809
effective length of database: 10,329,639
effective search space: 8356677951
effective search space used: 8356677951
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)